# iMaps Documentation

## iMaps Documentation

- [What is iMaps?](https://docs.imaps.goodwright.com/what-is-imaps.md)
- [Getting Started](https://docs.imaps.goodwright.com/guides/getting-started.md): Information to get started on iMaps. Last updated 25th May 2022.
- [Working with collections](https://docs.imaps.goodwright.com/guides/working-with-collections.md)
- [iCLIP](https://docs.imaps.goodwright.com/workflows/iclip.md)
- [Demultiplex and Analyse](https://docs.imaps.goodwright.com/workflows/iclip/demultiplex-and-analyse.md): When you have a multiplexed fastq file your first port of call for analysing iCLIP data will be the "Demultiplex and Analyse" workflow.
- [Primary Analysis](https://docs.imaps.goodwright.com/workflows/iclip/primary-analysis.md)
- [Graphical Overview](https://docs.imaps.goodwright.com/fundamentals/graphical-overview.md)
- [Bioinformatics file types](https://docs.imaps.goodwright.com/fundamentals/bioinformatics-file-types.md): In the world of bioinformatics there are a huge number of file types. This guide aims to help you to understand what these filetypes are and when they are commonly used.
- [Data](https://docs.imaps.goodwright.com/fundamentals/data.md)
- [Pipelines](https://docs.imaps.goodwright.com/fundamentals/pipelines.md)
- [Executions](https://docs.imaps.goodwright.com/fundamentals/executions.md)
- [Samples](https://docs.imaps.goodwright.com/fundamentals/samples.md)
- [Collections](https://docs.imaps.goodwright.com/fundamentals/collections.md)
- [Genomes](https://docs.imaps.goodwright.com/fundamentals/genomes.md)
- [Permissions](https://docs.imaps.goodwright.com/fundamentals/permissions.md)